PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv6_129340_cuyh.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 387aa    MW: 42362 Da    PI: 6.9429
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv6_129340_cuyh.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.18.6e-052793171255
                         HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         R +++ ++++ L +l+ +      +K + a++L++A+ YI+ Lq
  Bv6_129340_cuyh.t1 279 RKEKLGERIASLHQLVSPF-----GKTDTASVLTEAIGYIQFLQ 317
                         6677889999999999998.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.014267316IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-10277330IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.41E-5277321No hitNo description
Gene3DG3DSA:4.10.280.102.1E-7281327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MDSTNFQHHE QRQQQQQQQQ QQHLQDHFVG CSPLNIPSSS YGVSTSLQWN STILPTTTSS  60
DNSNAFDNKQ YESEFLSCTT STLPKIEDDM LSSFPSFGGL IHNPSTTNTL ENINPWFNGL  120
ISTSPTIPFS TRPGLMQLPG LEVNSWGHNN HGFHGTSILN QLGLVSSPNN STASTVSSSS  180
PRLGLNLQAM DFLGNNSSFS AQTRTMTYDA VDGEEGISPN GIIMSNKTST LMNGSLTGTK  240
RAAGSCSSDQ SKASSTSNNS VASNKKSPLK VSCPPFKVRK EKLGERIASL HQLVSPFGKT  300
DTASVLTEAI GYIQFLQDQI HTLCMPHAKP SRSKPCRPFQ MGIGNEDDGK EEERIELRRR  360
GLCLVPYSWT SYIPPTQMDA SNHPTYF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010679784.10.0PREDICTED: transcription factor bHLH110-like
TrEMBLA0A0J8C7B70.0A0A0J8C7B7_BETVU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.12e-32bHLH family protein